DNA origami design and implementation: the Romanian map

Laura Ioana Popa; Ana-Maria Dobre; Corina Itcus; Alexandru Amarioarei; Andrei Paun; Mihaela Paun; Felicia Pop; Iris Tusa; Minh-Kha Nguyen; Anton Kuzyk; Eugen Czeizler

DNA origami design and implementation: the Romanian map

Laura Ioana Popa, Ana-Maria Dobre, Corina Itcus^*, Alexandru Amarioarei, Andrei Paun, Mihaela Paun, Felicia Pop, Iris Tusa, Minh-Kha Nguyen, Anton Kuzyk, Eugen Czeizler

^*Korresponderande författare för detta arbete

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Forskningsoutput: Tidskriftsbidrag › Artikel › Vetenskaplig › Peer review

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Sammanfattning

Since its introduction in the early 2000s, DNA origami had a big impact on the development of nanotechnology by gathering numerous applications. During this time, many tools were designed and used to generate arbitrary shapes capable of self-assembly which make this technique more approachable. In this paper, we have created the map of Romania at nanoscale dimensions by using a new open-source software–PERDIX. For this purpose, we used a scaffold strand with a length of 6959 nucleotides and 162 staple strands with a variable length ranging between 20 and 63 nucleotides. All the computational tools that were used in this experiment are open-source and user-friendly.

Originalspråk	Engelska
Sidor (från-till)	1816
Antal sidor	1822
Tidskrift	Romanian Biotechnological Letters
Volym	25
Utgåva	4
Status	Publicerad - 2020
MoE-publikationstyp	A1 Tidskriftsartikel-refererad

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19Slutlig publicerad version, 617 KBLicens: CC BY-NC-ND

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https://www.rombio.org/vol.25/iss.4/publications.html

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1 Aktiv

AlgoNano: Algorithmic Nanotechnology: Modeling, Design and Automation of Synthetic Self-Assembly Systems (AlgoNano) (Academy of Finland)
Czeizler, E.
01/09/17 → 31/08/21
Projekt: Forskning

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abstract = "Since its introduction in the early 2000s, DNA origami had a big impact on the development of nanotechnology by gathering numerous applications. During this time, many tools were designed and used to generate arbitrary shapes capable of self-assembly which make this technique more approachable. In this paper, we have created the map of Romania at nanoscale dimensions by using a new open-source software–PERDIX. For this purpose, we used a scaffold strand with a length of 6959 nucleotides and 162 staple strands with a variable length ranging between 20 and 63 nucleotides. All the computational tools that were used in this experiment are open-source and user-friendly.",

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DNA origami design and implementation: the Romanian map. / Popa, Laura Ioana; Dobre, Ana-Maria; Itcus, Corina; Amarioarei, Alexandru; Paun, Andrei; Paun, Mihaela; Pop, Felicia; Tusa, Iris; Nguyen, Minh-Kha; Kuzyk, Anton; Czeizler, Eugen.

I: Romanian Biotechnological Letters, Vol. 25, Nr. 4, 2020, s. 1816.

Forskningsoutput: Tidskriftsbidrag › Artikel › Vetenskaplig › Peer review

TY - JOUR

T1 - DNA origami design and implementation: the Romanian map

AU - Popa, Laura Ioana

AU - Dobre, Ana-Maria

AU - Itcus, Corina

AU - Amarioarei, Alexandru

AU - Paun, Andrei

AU - Paun, Mihaela

AU - Pop, Felicia

AU - Tusa, Iris

AU - Nguyen, Minh-Kha

AU - Kuzyk, Anton

AU - Czeizler, Eugen

PY - 2020

Y1 - 2020

N2 - Since its introduction in the early 2000s, DNA origami had a big impact on the development of nanotechnology by gathering numerous applications. During this time, many tools were designed and used to generate arbitrary shapes capable of self-assembly which make this technique more approachable. In this paper, we have created the map of Romania at nanoscale dimensions by using a new open-source software–PERDIX. For this purpose, we used a scaffold strand with a length of 6959 nucleotides and 162 staple strands with a variable length ranging between 20 and 63 nucleotides. All the computational tools that were used in this experiment are open-source and user-friendly.

AB - Since its introduction in the early 2000s, DNA origami had a big impact on the development of nanotechnology by gathering numerous applications. During this time, many tools were designed and used to generate arbitrary shapes capable of self-assembly which make this technique more approachable. In this paper, we have created the map of Romania at nanoscale dimensions by using a new open-source software–PERDIX. For this purpose, we used a scaffold strand with a length of 6959 nucleotides and 162 staple strands with a variable length ranging between 20 and 63 nucleotides. All the computational tools that were used in this experiment are open-source and user-friendly.

KW - Nanotechnology

KW - DNA origami

KW - Nanostructure

KW - Romanian map

UR - https://www.rombio.org/vol.25/iss.4/publications.html

M3 - Article

VL - 25

SP - 1816

JO - Romanian Biotechnological Letters

JF - Romanian Biotechnological Letters

SN - 1224-5984

IS - 4

ER -

DNA origami design and implementation: the Romanian map

Sammanfattning

Åtkomst av dokument

Andra filer och länkar

AlgoNano: Algorithmic Nanotechnology: Modeling, Design and Automation of Synthetic Self-Assembly Systems (AlgoNano) (Academy of Finland)

Citera det här