TY - JOUR
T1 - Plasma Protein Binding of Anisomelic Acid: Spectroscopy and Molecular Dynamic Simulations
AU - Rajendran, Senthil
AU - Marimuthu, Parthiban
AU - Paul, Preethy
AU - Manojkumar, Yesaiyan
AU - Arunachalam, Sankaralingam
AU - Eriksson, John
AU - Johnson, Mark S
PY - 2016
Y1 - 2016
N2 - Anisomelic acid (AA) is a macrocyclic cembranolide compound extracted from Anisomeles herbal species. Recently, we have shown that AA possesses both anticancer and antiviral activity. However, to date, the plasma protein binding properties of AA are unknown. Here, we describe the molecular interactions of AA with two serum proteins, human serum albumin (HSA) and bovine serum albumin (BSA), adopting multiple physicochemical methods. Besides, molecular docking and dynamics simulations were performed to predict the interaction mode and the dynamic behavior of AA with HSA and BSA. The experimental results revealed that hydrophobic forces play a significant part in the interaction of AA to HSA and BSA. The outcomes of the principal components analysis (PCA) of the poses based on root-mean-squared distances showed less variation in AA–HSA, opposed to what is seen for BSA–AA. Furthermore, binding free energies estimated for AA–HSA and AA–BSA complexes at different temperatures (298, 303, 308, and 313 K) based on molecular mechanics-generalized Born surface area (MMGBSA) approaches were well correlated with our experimental results.
AB - Anisomelic acid (AA) is a macrocyclic cembranolide compound extracted from Anisomeles herbal species. Recently, we have shown that AA possesses both anticancer and antiviral activity. However, to date, the plasma protein binding properties of AA are unknown. Here, we describe the molecular interactions of AA with two serum proteins, human serum albumin (HSA) and bovine serum albumin (BSA), adopting multiple physicochemical methods. Besides, molecular docking and dynamics simulations were performed to predict the interaction mode and the dynamic behavior of AA with HSA and BSA. The experimental results revealed that hydrophobic forces play a significant part in the interaction of AA to HSA and BSA. The outcomes of the principal components analysis (PCA) of the poses based on root-mean-squared distances showed less variation in AA–HSA, opposed to what is seen for BSA–AA. Furthermore, binding free energies estimated for AA–HSA and AA–BSA complexes at different temperatures (298, 303, 308, and 313 K) based on molecular mechanics-generalized Born surface area (MMGBSA) approaches were well correlated with our experimental results.
U2 - 10.1021/acs.jcim.6b00445
DO - 10.1021/acs.jcim.6b00445
M3 - Artikel
SN - 1549-9596
VL - 56
SP - 2401
EP - 2412
JO - Journal of Chemical Information and Modeling
JF - Journal of Chemical Information and Modeling
IS - 12
ER -