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Algorithmic Nanotechnology: Modeling, Design and Automation of Synthetic Self-Assembly Systems (AlgoNano) (Academy of Finland)

  • Czeizler, Eugen (Vastuullinen tutkija)

Projektin tiedot

Description

In the project we tackle two key research directions for the field of DNA Nanotechnology. First, we aimed at developing a generic kinetic modeling framework for DNA assembly systems, in which any DNA-based dynamical mechanism can be embedded and simulated numerically. The second major research direction is the development of the fundamentals of the algorithmic design of 3D reinforced nanostructures by use of the innovative DNA-origami beam-scaffolding technique (DNA-BEAM).

Key findings

We created VDNA-Lab a software tool for computational modeling, simulation, and visualization of DNA multi-strand dynamics

We propose a new design architecture for beam-scaffolding DNA bas-relief nanostructured
LyhytotsikkoAlgorithmic Nanotechnology
AkronyymiAlgoNano
TilaPäättynyt
Todellinen alku/loppupvm01/09/1731/08/21
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    Popa, L. I., Dobre, A.-M., Itcus, C., Amarioarei, A., Paun, A., Paun, M., Pop, F., Tusa, I., Nguyen, M.-K., Kuzyk, A. & Czeizler, E., 2020, julkaisussa: Romanian Biotechnological Letters. 25, 4, s. 1816 1822 Sivumäärä

    Tutkimustuotos: LehtiartikkeliArtikkeliTieteellinenvertaisarvioitu

    Open access
    Tiedosto
    104 Lataukset (Pure)
  • Inner symmetries of the spatially singular part of the solutions of the Burgers equation and their Lie representations

    Barad, G., Czeizler, E. & Paun, A., 2020, julkaisussa: Results in Physics. 19, 103322.

    Tutkimustuotos: LehtiartikkeliArtikkeliTieteellinenvertaisarvioitu

    Open access
    1 Sitaatiot (Scopus)
  • Probabilistic modeling of the self-assembly of the1-dimensional DNA structures

    Amarioarei, A., Barad, G., Czeizler, E., Paun, A. & Trandafir, R., 2020, julkaisussa: Romanian Journal of Information Science and Technology. 23, 3, s. 311-329 18 Sivumäärä

    Tutkimustuotos: LehtiartikkeliArtikkeliTieteellinenvertaisarvioitu

    Open access