REMBI: Recommended Metadata for Biological Images-enabling reuse of microscopy data in biology

Ugis Sarkans; Wah Chiu; Lucy Collinson; Michele C Darrow; Jan Ellenberg; David Grunwald; Jean-Karim Hériché; Andrii Iudin; Gabriel G Martins; Terry  Meehan; Kedar Narayan; Ardan Patwardhan; Matthew Robert Geoffrey Russell; Helen R Saibil; Caterina Strambio-De-Castillia; Jason R Swedlow; Christian Tischer; Virginie Uhlmann; Paul Verkade; Mary Barlow; Omer Bayraktar; Ewan Birney; Cesare Catavitello; Christopher Cawthorne; Stephan Wagner-Conrad; Elizabeth Duke; Perrine Paul-Gilloteaux; Emmanuel Gustin; Maria Harkiolaki; Pasi Kankaanpää; Thomas Lemberger; Jo McEntyre; Josh Moore; Andrew W Nicholls; Shuichi Onami; Helen Parkinson; Maddy Parsons; Marina Romanchikova; Nicholas Sofroniew; Jim Swoger; Nadine Utz; Lenard M Voortman; Frances Wong; Peijun Zhang; Gerard J Kleywegt; Alvis Brazma

doi:10.1038/s41592-021-01166-8

REMBI: Recommended Metadata for Biological Images-enabling reuse of microscopy data in biology

Ugis Sarkans
, Wah Chiu
, Lucy Collinson
, Michele C Darrow
, Jan Ellenberg
, David Grunwald
, Jean-Karim Hériché
, Andrii Iudin
, Gabriel G Martins
, Terry Meehan
, Kedar Narayan
, Ardan Patwardhan
, Matthew Robert Geoffrey Russell
, Helen R Saibil
, Caterina Strambio-De-Castillia
, Jason R Swedlow
, Christian Tischer
, Virginie Uhlmann
, Paul Verkade
, Mary Barlow

Omer Bayraktar, Ewan Birney, Cesare Catavitello, Christopher Cawthorne, Stephan Wagner-Conrad, Elizabeth Duke, Perrine Paul-Gilloteaux, Emmanuel Gustin, Maria Harkiolaki, Pasi Kankaanpää, Thomas Lemberger, Jo McEntyre, Josh Moore, Andrew W Nicholls, Shuichi Onami, Helen Parkinson, Maddy Parsons, Marina Romanchikova, Nicholas Sofroniew, Jim Swoger, Nadine Utz, Lenard M Voortman, Frances Wong, Peijun Zhang, Gerard J Kleywegt, Alvis Brazma

Turku Bioscience Centre

Research output: Contribution to journal › Comment/debate › Scientific

94 Citations (Scopus)

Original language	English
Journal	Nature Methods
DOIs	https://doi.org/10.1038/s41592-021-01166-8
Publication status	Published - 2021
MoE publication type	B1 Article in a scientific magazine

Access to Document

10.1038/s41592-021-01166-8

Cite this

Sarkans, U., Chiu, W., Collinson, L., Darrow, M. C., Ellenberg, J., Grunwald, D., Hériché, J.-K., Iudin, A., Martins, G. G., Meehan, T., Narayan, K., Patwardhan, A., Russell, M. R. G., Saibil, H. R., Strambio-De-Castillia, C., Swedlow, J. R., Tischer, C., Uhlmann, V., Verkade, P., ... Brazma, A. (2021). REMBI: Recommended Metadata for Biological Images-enabling reuse of microscopy data in biology. Nature Methods. https://doi.org/10.1038/s41592-021-01166-8

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title = "REMBI: Recommended Metadata for Biological Images-enabling reuse of microscopy data in biology",

author = "Ugis Sarkans and Wah Chiu and Lucy Collinson and Darrow, \{Michele C\} and Jan Ellenberg and David Grunwald and Jean-Karim H{\'e}rich{\'e} and Andrii Iudin and Martins, \{Gabriel G\} and Terry Meehan and Kedar Narayan and Ardan Patwardhan and Russell, \{Matthew Robert Geoffrey\} and Saibil, \{Helen R\} and Caterina Strambio-De-Castillia and Swedlow, \{Jason R\} and Christian Tischer and Virginie Uhlmann and Paul Verkade and Mary Barlow and Omer Bayraktar and Ewan Birney and Cesare Catavitello and Christopher Cawthorne and Stephan Wagner-Conrad and Elizabeth Duke and Perrine Paul-Gilloteaux and Emmanuel Gustin and Maria Harkiolaki and Pasi Kankaanp{\"a}{\"a} and Thomas Lemberger and Jo McEntyre and Josh Moore and Nicholls, \{Andrew W\} and Shuichi Onami and Helen Parkinson and Maddy Parsons and Marina Romanchikova and Nicholas Sofroniew and Jim Swoger and Nadine Utz and Voortman, \{Lenard M\} and Frances Wong and Peijun Zhang and Kleywegt, \{Gerard J\} and Alvis Brazma",

year = "2021",

doi = "10.1038/s41592-021-01166-8",

language = "English",

journal = "Nature Methods",

issn = "1548-7091",

publisher = "Nature Research",

}

Sarkans, U, Chiu, W, Collinson, L, Darrow, MC, Ellenberg, J, Grunwald, D, Hériché, J-K, Iudin, A, Martins, GG, Meehan, T, Narayan, K, Patwardhan, A, Russell, MRG, Saibil, HR, Strambio-De-Castillia, C, Swedlow, JR, Tischer, C, Uhlmann, V, Verkade, P, Barlow, M, Bayraktar, O, Birney, E, Catavitello, C, Cawthorne, C, Wagner-Conrad, S, Duke, E, Paul-Gilloteaux, P, Gustin, E, Harkiolaki, M, Kankaanpää, P, Lemberger, T, McEntyre, J, Moore, J, Nicholls, AW, Onami, S, Parkinson, H, Parsons, M, Romanchikova, M, Sofroniew, N, Swoger, J, Utz, N, Voortman, LM, Wong, F, Zhang, P, Kleywegt, GJ & Brazma, A 2021, 'REMBI: Recommended Metadata for Biological Images-enabling reuse of microscopy data in biology', Nature Methods. https://doi.org/10.1038/s41592-021-01166-8

TY - JOUR

T1 - REMBI: Recommended Metadata for Biological Images-enabling reuse of microscopy data in biology

AU - Sarkans, Ugis

AU - Chiu, Wah

AU - Collinson, Lucy

AU - Darrow, Michele C

AU - Ellenberg, Jan

AU - Grunwald, David

AU - Hériché, Jean-Karim

AU - Iudin, Andrii

AU - Martins, Gabriel G

AU - Meehan, Terry

AU - Narayan, Kedar

AU - Patwardhan, Ardan

AU - Russell, Matthew Robert Geoffrey

AU - Saibil, Helen R

AU - Strambio-De-Castillia, Caterina

AU - Swedlow, Jason R

AU - Tischer, Christian

AU - Uhlmann, Virginie

AU - Verkade, Paul

AU - Barlow, Mary

AU - Bayraktar, Omer

AU - Birney, Ewan

AU - Catavitello, Cesare

AU - Cawthorne, Christopher

AU - Wagner-Conrad, Stephan

AU - Duke, Elizabeth

AU - Paul-Gilloteaux, Perrine

AU - Gustin, Emmanuel

AU - Harkiolaki, Maria

AU - Kankaanpää, Pasi

AU - Lemberger, Thomas

AU - McEntyre, Jo

AU - Moore, Josh

AU - Nicholls, Andrew W

AU - Onami, Shuichi

AU - Parkinson, Helen

AU - Parsons, Maddy

AU - Romanchikova, Marina

AU - Sofroniew, Nicholas

AU - Swoger, Jim

AU - Utz, Nadine

AU - Voortman, Lenard M

AU - Wong, Frances

AU - Zhang, Peijun

AU - Kleywegt, Gerard J

AU - Brazma, Alvis

PY - 2021

Y1 - 2021

U2 - 10.1038/s41592-021-01166-8

DO - 10.1038/s41592-021-01166-8

M3 - Comment/debate

SN - 1548-7091

JO - Nature Methods

JF - Nature Methods

ER -