Germline-specific RNA helicase DDX4 forms cytoplasmic granules in cancer cells and promotes tumor growth

Opeyemi Olotu, Anna-Riina Koskenniemi, Lin Ma, Valeriy Paramonov, Sini Laasanen, Elina Louramo, Matthieu Bourgery, Tiina Lehtiniemi, Samuli Laasanen, Adolfo Rivero-Müller, Eliisa Löyttyniemi, Cecilia Sahlgren, Jukka Westermarck, Sami Ventelä, Tapio Visakorpi, Matti Poutanen, Paula Vainio, Juho-Antti Mäkelä, Noora Kotaja

Research output: Contribution to journalArticleScientificpeer-review

Abstract

Cancer cells undergo major epigenetic alterations and transcriptomic changes, including ectopic expression of tissue- and cell-type-specific genes. Here, we show that the germline-specific RNA helicase DDX4 forms germ-granule-like cytoplasmic ribonucleoprotein granules in various human tumors, but not in cultured cancer cells. These cancerous DDX4 complexes contain RNA-binding proteins and splicing regulators, including many known germ granule components. The deletion of DDX4 in cancer cells induces transcriptomic changes and affects the alternative splicing landscape of a number of genes involved in cancer growth and invasiveness, leading to compromised capability of DDX4-null cancer cells to form xenograft tumors in immunocompromised mice. Importantly, the occurrence of DDX4 granules is associated with poor survival in patients with head and neck squamous cell carcinoma and higher histological grade of prostate cancer. Taken together, these results show that the germ-granule-resembling cancerous DDX4 granules control gene expression and promote malignant and invasive properties of cancer cells.
Original languageEnglish
Article number114430
Number of pages32
JournalCell Reports
Volume43
Issue number7
DOIs
Publication statusPublished - 23 Jul 2024
MoE publication typeA1 Journal article-refereed

Keywords

  • Cancer
  • Molecular biology
  • DDX4
  • RNA regulation
  • RNP granules
  • Cancer-germline antigens
  • Tumor growth

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