Adj. Prof. in Structural Biochemistry, Senior lecturer

Tiina Salminen

Senior Lecturer, Biochemistry
Email: tiina.salminen@abo.fi
Mobile: +358-405151201
Phone: +358-2-2154003


Professional interests

My research team at the Structural Bioinformatics Laboratory (SBL) focuses on 3D structures of proteins and, particularly, utilizing 3D structures to predict and understand protein function. We are interested in finding out how proteins interact with other molecules and what is the structural basis for their ligand specificity. Some of the proteins we are working with are important in human health and disease, are used as biocatalysts to produce drug molecules or in diagnostics of disease.


Research Areas


Peer-reviewed publications

A1 Journal article (refereed)
Crystal structure of dimeric Synechococcus spermidine synthase with bound polyamine substrate and product (2019)
Gabriela Guédez, Apiradee Pothipongsa, Saija Sirén, Arto Liljeblad, Saowarath Jantaro, Aran Incharoensakdi, Tiina A. Salminen
Biochemical Journal
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A1 Journal article (refereed)
Predicting the ligand-binding properties of Borrelia burgdorferi s.s. Bmp proteins in light of the conserved features of related Borrelia proteins (2019)
Mia Åstrand, Julia Cuellar, Jukka Hytönen, Tiina A. Salminen
Journal of Theoretical Biology
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A1 Journal article (refereed)
Arabidopsis FNRL protein is an NADPH-dependent chloroplast oxidoreductase resembling bacterial ferredoxin-NADP+ reductases (2018)
Koskela M, Dahlström K, Goñi G, Lehtimäki N, Nurmi M, Velazquez-Campoy A, Hanke G, Bölter B, Salminen T, Medina M, Mulo P
Physiologia Plantarum
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A2 Review article, Literature review, Systematic review
Deciphering the Evolution and Development of the Cuticle by Studying Lipid Transfer Proteins in Mosses and Liverworts. (2018)
Salminen TA, Eklund DM, Joly V, Blomqvist K, Matton DP, Edqvist J
Plants
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A1 Journal article (refereed)
Mapping the interaction site and effect of the Siglec-9 inflammatory biomarker on human primary amine oxidase. (2018)
Lopes de Carvalho L, Elovaara H, de Ruyck J, Vergoten G, Jalkanen S, Guédez G, Salminen TA
Scientific Reports
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A1 Journal article (refereed)
Oligomannosidic glycans at Asn-110 are essential for secretion of human diamine oxidase. (2018)
Gludovacz, Maresch, Lopes de Carvalho, Puxbaum, Baier, Sützl, Guédez, Grünwald-Gruber, Ulm, Pils, Ristl, Altmann, Jilma, Salminen, Borth, Boehm
Journal of Biological Chemistry
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A1 Journal article (refereed)
Plant lipid transfer proteins: are we finally closing in on the roles of these enigmatic proteins? (2018)
Edqvist J, Blomqvist K, Nieuwland J, Salminen TA
Journal of Lipid Research
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A1 Journal article (refereed)
Proline hydroxylation in collagen supports integrin binding by two distinct mechanisms (2018)
Sipilä KH, Drushinin K, Rappu P, Jokinen J, Salminen TA, Salo AM, Käpylä J, Myllyharju J, Heino J
Journal of Biological Chemistry
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A1 Journal article (refereed)
Sumoylation of Notch1 represses its target gene expression during cell stress (2018)
Christian JM Antila, Vilma Rraklli, Henri A Blomster, Käthe M Dahlström, Tiina A Salminen, Johan Holmberg, Lea Sistonen, Cecilia Sahlgren
Cell Death and Differentiation
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A1 Journal article (refereed)
Biochemical characterization and homology modeling of polyamine oxidase from cyanobacterium Synechocystis sp. PCC 6803. (2017)
Samasil K, Lopes de Carvalho L, Mäenpää P, Salminen TA, Incharoensakdi A
Plant Physiology and Biochemistry
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A1 Journal article (refereed)
Molecular characterization and homology modeling of spermidine synthase from Synechococcus sp. PCC 7942. (2017)
Pothipongsa A, Jantaro S, Salminen TA, Incharoensakdi A
World Journal of Microbiology and Biotechnology
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A1 Journal article (refereed)
Slr0006-like proteins: A TsaC/TsaC2/YciO subfamily exclusive to cyanobacteria (2017)
Carvalho Leonor L., Salminen Tiina A., Dahlström Käthe M.
Molecular Phylogenetics and Evolution
A2 Review article, Literature review, Systematic review
Tailored approaches in drug development and diagnostics: from molecular design to biological model systems (2017)
Cecilia Sahlgren, Annika Meinander, Hongbo Zhang, Fang Cheng, Maren Preis, Chunlin Xu, Tiina A. Salminen, Diana Toivola, Daniel Abankwa, Ari Rosling, Didem Şen Karaman, Outi M. H. Salo-Ahen, Ronald Österbacka, John E. Eriksson, Stefan Willför, Ion Petre, Jouko Peltonen, Reko Leino, Mark Johnson, Jessica Rosenholm, Niklas Sandler
Advanced Healthcare Materials
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A1 Journal article (refereed)
Dual targeted poplar ferredoxin NADP(+) oxidoreductase interacts with hemoglobin 1 (2016)
Jokipii-Lukkari S, Kastaniotis AJ, Parkash V, Sundström R, Leiva-Eriksson N, Nymalm Y, Blokhina O, Kukkola E, Fagerstedt KV, Salminen TA, Läärä E, Bulow L, Ohlmeier S, Hiltunen JK, Kallio PT, Häggman H
Plant Science
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A2 Review article, Literature review, Systematic review
Lipid transfer proteins: classification, nomenclature, structure, and function (2016)
Salminen TA, Blomqvist K, Edqvist J
Planta
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A1 Journal article (refereed)
Multivalent Interactions of Human Primary Amine Oxidase with the V and C2₂ Domains of Sialic Acid-Binding Immunoglobulin-Like Lectin-9 Regulate Its Binding and Amine Oxidase Activity (2016)
Heli Elovaara, Vimal Parkash, Ruth Fair-Mäkelä, Outi M. H. Salo-Ahen, Gabriela Guédez, Eva Bligt-Lindén, Janne Grönholm, Sirpa Jalkanen, Tiina A. Salminen
PLoS ONE
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A1 Journal article (refereed)
Deciphering tissue-induced Klebsiella pneumoniae lipid A structure (2015)
Llobet E, Martínez-Moliner V, Moranta D, Dahlström KM, Regueiro V, Tomás A, Cano V, Pérez-Gutiérrez C, Frank CG, Fernández-Carrasco H, Insua JL, Salminen TA, Garmendia J, Bengoechea JA
Proceedings of the National Academy of Sciences
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A1 Journal article (refereed)
Directed evolution on FucO - structural explanations for changes in substrate scope (2015)
Dahlström KM, Blikstad C, Widersten M, Salminen TA
Protein Science
A1 Journal article (refereed)
Characterization of the GPI-anchored lipid transfer proteins in the moss Physcomitrella patens (2014)
Monika M. Edstam, Maiju Laurila, Andrey Höglund, Amitha Raman, Käthe M. Dahlström, Tiina A. Salminen, Johan Edqvist, Kristina Blomqvist
Plant Physiology and Biochemistry
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A1 Journal article (refereed)
Evolution, Three-Dimensional Model and Localization of Truncated Hemoglobin PttTrHb of Hybrid Aspen (2014)
Estelle Dumont, Soile Jokipii-Lukkari, Vimal Parkash, Jaana Vuosku, Robin Sundström, Yvonne Nymalm, Suvi Sutela, Katariina Taskinen, Pauli T. Kallio, Tiina A. Salminen, Hely Häggman
PLoS ONE
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A1 Journal article (refereed)
Posttranslational Modifications of FERREDOXIN-NADP+ OXIDOREDUCTASE in Arabidopsis Chloroplasts (2014)
Lehtimäki N, Koskela MM, Dahlström KM, Pakula E, Lintala M, Scholz M, Hippler M, Hanke GT, Rokka A, Battchikova N, Salminen TA, Mulo P
Plant Physiology
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A1 Journal article (refereed)
Substrate scope and selectivity in offspring to an enzyme subjected to directed evolution (2014)
Cecilia Blikstad, Käthe M Dahlström, Tiina A. Salminen, Mikael Widersten
FEBS Journal
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A1 Journal article (refereed)
Novel Pyridazinone Inhibitors for Vascular Adhesion Protein-1 (VAP-1): Old Target-New Inhibition Mode (2013)
Eva Bligt-Lindén, Marjo Pihlavisto, István Szatmári, Zbyszek Otwinowski, David J. Smith, László Lázár, Ferenc Fülöp, Tiina A. Salminen
Journal of Medicinal Chemistry
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A1 Journal article (refereed)
Overexpression of chloroplast NADPH-dependent thioredoxin reductase
in Arabidopsis enhances leaf growth and elucidates in vivo function of reductase
and thioredoxin domains.
(2013)
Toivola J, Nikkanen L, Dahlström KM, Salminen TA, Lepistö A, Vignols HF, Rintamäki E.
Frontiers in Plant Science
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A1 Journal article (refereed)
Stereoselective Oxidation of Aryl-Substituted Vicinal Diols into Chiral α-Hydroxy Aldehydes by Re-Engineered Propanediol Oxidoreductase. (2013)
Blikstad Cecilia, Dahlström Käthe M., Salminen Tiina A., Widersten Mikael
ACS Catalysis
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A1 Journal article (refereed)
Structural model, physiology and regulation of Slr0006 in Synechocystis PCC 6803. (2013)
Carmel D, Dahlström KM, Holmström M, Allahverdiyeva Y, Battchikova N, Aro EM, Salminen TA, Mulo P
Archives of Microbiology
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A1 Journal article (refereed)
Deciphering the acylation pattern of Yersinia enterocolitica lipid A. (2012)
Reinés M, Llobet E, Dahlström KM, Pérez-Gutiérrez C, Llompart CM, Torrecabota N, Salminen TA, Bengoechea JA
PLoS Pathogens
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A1 Journal article (refereed)
Operon flv4-flv2 Provides Cyanobacterial Photosystem II with Flexibility of Electron Transfer (2012)
Zhang PP, Eisenhut M, Brandt AM, Carmel D, Silen HM, Vass I, Allahverdiyeva Y, Salminen TA, Aro EM
Plant Cell
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A4 Conference proceedings
Characterization of human primary amine oxidase/Sialic acid binding Ig-like lectin 10 interaction (2011)
Elovaara H, Parkash V, Salminen TA, Jalkanen S
European Biophysics Journal
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A1 Journal article (refereed)
Characterization of Interactions Between Human Membrane Primary Amine Oxidase (hAOC3) and Sialic Acid Binding Ig-Like Lectin 10 (Siglec-10) (2011)
Heli Elovaara, Vimal Parkash, Tiina A. Salminen, Sirpa Jalkanen
Scandinavian Journal of Immunology
A1 Journal article (refereed)
Evolutionary History of the Non-Specific Lipid Transfer Proteins (2011)
Edstam MM, Viitanen L, Salminen TA, Edqvist J
Molecular Plant
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A1 Journal article (refereed)
Identification of Two Imidazole Binding Sites and Key Residues for Substrate Specificity in Human Primary Amine Oxidase AOC3 (2011)
Elovaara H, Kidron H, Parkash V, Nymalm Y, Bligt E, Ollikka P, Smith DJ, Pihlavisto M, Salmi M, Jalkanen S, Salminen TA
Biochemistry
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A1 Journal article (refereed)
Characterization of the Six Glycosyltransferases Involved in the Biosynthesis of Yersinia enterocolitica Serotype O:3 Lipopolysaccharide Outer Core (2010)
Pinta E, Duda KA, Hanuszkiewicz A, Salminen TA, Bengoechea JA, Hyytiäinen H, Lindner B, Radziejewska-Lebrecht J, Holst O, Skurnik M
Journal of Biological Chemistry
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A1 Journal article (refereed)
Characterization of the substrate-binding PotD subunit in Synechocystis sp. strain PCC 6803 (2010)
Anna-Maria Brandt, Wuttinun Raksajit, Panutda Yodsang, Paula Mulo, Aran Incharoensakdi, Tiina A. Salminen, Pirkko Mäenpää
Archives of Microbiology
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A1 Journal article (refereed)
Heterotrimerization of Heat-Shock Factors 1 and 2 Provides a Transcriptional Switch in Response to Distinct Stimuli (2009)
Sandqvist A, Björk JK, Åkerfelt M, Chitikova Z, Grichine A, Vourch C, Jolly C, Salminen TA, Nymalm Y, Sistonen L
Molecular Biology of the Cell
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A1 Journal article (refereed)
Human Siglec-10 can bind to vascular adhesion protein-1 and serves as its substrate (2009)
Kivi E, Elima K, Aalto K, Nymalm Y, Auvinen K, Koivunen E, Otto DM, Crocker PR, Salminen TA, Salmi M, Jalkanen S
Blood
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A1 Journal article (refereed)
Novel Vascular Endothelial Growth Factor D Variants with Increased Biological Activity (2009)
Toivanen PI, Nieminen T, Viitanen L, Alitalo A, Roschier M, Jauhiainen S, Markkanen JE, Laitinen OH, Airenne TT, Salminen TA, Johnson MS, Airenne KJ, Ylä-Herttuala S
Journal of Biological Chemistry
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A1 Journal article (refereed)
Transcriptional regulation and structural modeling of the FutC subunit of an ABC-type iron transporter in Synechocystis sp. strain PCC 6803 (2009)
Brandt AM, Raksajit W, Mulo P, Incharoensakdi A, Salminen TA, Mäenpää P
Archives of Microbiology
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A1 Journal article (refereed)
Arabidopsis sterol carrier protein-2 is required for normal development of seeds and seedlings (2008)
Bing Song Zheng, Elin Rönnberg, Lenita Viitanen, Tiina A. Salminen, Krister Lundgren, Thomas Moritz, Johan Edqvist
Journal of Experimental Botany
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A1 Journal article (refereed)
c-Jun supports ribosomal RNA processing and nucleolar localization of RNA helicase DDX21 (2008)
Tim H. Holmström, Antoine Mialon, Marko Kallio, Yvonne Nymalm, Leni Mannermaa, Tina Holm, Henrik Johansson, Elizabeth Black, David Gillespie, Tiina A. Salminen, Ülo Langel, Benigno C. Valdez., Jukka Westermarck
Journal of Biological Chemistry
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A1 Journal article (refereed)
Effects of conformational activation of integrin alpha 1I and alpha 2I domains on selective recognition of laminin and collagen subtypes (2008)
Mira Tulla, Matti Lahti, J. Santeri Puranen, Anna-Maria Brandt, Jarmo Käpylä, Anna Domogatskaya, Tiina A.Salminen, Karl Tryggvason, Mark S.Johnson, Jyrki Heino
Experimental Cell Research
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A1 Journal article (refereed)
Identification of a glycosphingolipid transfer protein GLTP1 in Arabidopsis thaliana (2008)
West G, Viitanen L, Alm C, Mattjus P, Salminen TA, Edqvist J
FEBS Journal
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A1 Journal article (refereed)
Functional Classification of Amino Acid Decarboxylases from the Alanine Racemase Structural Family by Phylogenetic Studies (2007)
Kidron H, Repo S, Johnson MS, Salminen TA
Molecular Biology and Evolution
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A1 Journal article (refereed)
Structural and functional characterization of ferredoxin-NADP(+)-oxidoreductase using knock-out mutants of Arabidopsis (2007)
Lintala M, Allahverdiyeva Y, Kidron H, Piippo M, Battchikova N, Suorsa M, Rintamäki E, Salminen TA, Aro EM, Mulo P
Plant Journal
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A1 Journal article (refereed)
Structure and characterization of a novel chicken biotin-binding protein A (BBP-A) (2007)
Hytonen VP, Maatta JAE, Niskanen EA, Huuskonen J, Helttunen KJ, Halling KK, Nordlund HR, Rissanen K, Johnson MS, Salminen TA, Kulomaa MS, Laitinen OH, Airenne TT
BMC STRUCTURAL BIOLOGY
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A1 Journal article (refereed)
Binding properties of HABA-type azo derivatives to avidin and avidin-related protein 4 (2006)
Susanna Repo, Tiina A.Paldanius, Vesa P. Hytönen, Thomas K. M. Nyholm, Katrin K. Halling, Juhani Huuskonen, Olli T. Pentikäinen, Kari Rissanen, J. Peter Slotte, Tomi T. Airenne, Tiina A. Salminen, Markku S .Kulomaa, Mark S.Johnson
Chemistry and Biology
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A1 Journal article (refereed)
Characterization of SCP-2 from Euphorbia lagascae reveals that a single Leu/Met exchange enhances sterol transfer activity (2006)
Viitanen L, Nylund M, Eklund DM, Alm C, Eriksson AK, Tuuf J, Salminen TA, Mattjus P, Edqvist J
FEBS Journal
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A1 Journal article (refereed)
Controlling quaternary structure assembly: Subunit interface engineering and crystal structure of dual chain avidin (2006)
Vesa P.Hytönen, JarnoHörhä, Tomi T.Airenne, Einari A.Niskanen, Kaisa J.Helttunen, Mark S.Johnson, Tiina A.Salminen, Markku S.Kulomaa, Henri R.Nordlund
Journal of Molecular Biology
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A1 Journal article (refereed)
Structural evidence for adaptive ligand binding of glycolipid transfer protein (2006)
Airenne TT, Kidron H, Nymalm Y, Nylund M, West G, Mattjus P, Salminen TA
Journal of Molecular Biology
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A1 Journal article (refereed)
Avidin related protein 2 shows unique structural and functional features among the avidin protein family (2005)
Vesa P Hytönen, Juha AE Määttä, Heidi Kidron, Katrin K Halling, Jarno Hörhä, Tuomas Kulomaa, Thomas KM Nyholm, Mark S Johnson, Tiina A Salminen, Markku S Kulomaa and Tomi T Airenne
BMC Biotechnology
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A1 Journal article (refereed)
Crystal structure of the human vascular adhesion protein-1: Unique structural features with functional implications (2005)
Airenne TT, Nymalm Y, Kidron H, Smith DJ, Pihlavisto M, Salmi M, Jalkanen S, Johnson MS, Salminen TA
Protein Science
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A1 Journal article (refereed)
Efficient production of active chicken avidin using a bacterial signal peptide in Escherichia coli (2004)
Hytönen VR, Laitinen OH, Airenne TT, Kidron H, Meltola NJ, Porkka EJ, Hörhä J, Paldanius T, Määttä JAE, Nordlund HR, Johnson MS, Salminen TA, Airenne KJ, Ylä-Herttuala S, Kulomaa MS
Biochemical Journal
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A1 Journal article (refereed)
Jararhagin-derived RKKH peptides induce structural changes in alpha I-1 domain of human integrin alpha(1)beta(1) (2004)
Nymalm Y, Puranen JS, Nyholm TKM, Käpylä J, Kidron H, Pentikäinen OT, Airenne TT, Heino J, Slotte JP, Johnson MS, Salminen TA
Journal of Biological Chemistry
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A1 Journal article (refereed)
Plants express a lipid transfer protein with high similarity to mammalian sterol carrier protein-2 (2004)
Edqvist J, Rönnberg E, Rosenquist S, Blomqvist K, Viitanen L, Salminen TA, Nylund M, Tuuf J, Mattjus P
Journal of Biological Chemistry
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A1 Journal article (refereed)
Crystallization and preliminary X-ray analysis of the human vascular adhesion protein-1 (2003)
Nymalm Y, Kidron H, Söderholm A, Viitanen L, Kaukonen K, Pihlavisto M, Smith D, Veromaa T, Airenne TT, Johnson MS, Salminen TA
Acta Crystallographica Section D: Biological Crystallography
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A1 Journal article (refereed)
Chloroethylclonidine and 2-aminoethyl methanethiosulfonate recognize two different conformations of the human alpha(2A)-adrenergic receptor (1999)
Anne Marjamäki, Heini Frang, Marjo Pihlavisto, Anna-Marja Hoffrén, Tiina Salminen, Mark S. Johnson, Jaana Kallio, Jonathan A. Javitch, Mika Scheinin
Journal of Biological Chemistry
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A1 Journal article (refereed)
Production, crystallization and preliminary X-ray analysis of the human integrin alpha(1) I domain (1999)
T. A. Salminen, Y. Nymalm, J. Kankare, J. Käpylä, J. Heino and M. S. Johnson
Acta Crystallographica Section D: Biological Crystallography
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A1 Journal article (refereed)
Structural model of the catalytic domain of an enzyme with cell adhesion activity: human vascular adhesion protein-1 (HVAP-1) D4 domain is an amine oxidase (1998)
Salminen TA, Smith DJ, Jalkanen S, Johnson MS
Protein Engineering, Design and Selection
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A1 Journal article (refereed)
Structural and functional consequences of substitutions at the tyrosine 55 lysine 104 hydrogen bond in Escherichia coli inorganic pyrophosphatase (1997)
Fabrichniy IP, Kasho VN, Hyytia T, Salminen T, Halonen P, Dudarenkov VY, Heikinheimo P, Chernyak VY, Goldman A, Lahti R, Cooperman BS, Baykov AA
Biochemistry
A1 Journal article (refereed)
An unusual route to thermostability disclosed by the comparison of Thermus thermophilus and Escherichia coli inorganic pyrophosphatases (1996)
Salminen T, Teplyakov A, Kankare J, Cooperman BS, Lahti R, Goldman A
Protein Science
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A1 Journal article (refereed)
An unusual route to thermostability in pyrophosphatases (1996)
Goldman A, Salminen T, Teplyakov A, Cooperman B, Lahti R
Acta Crystallographica Section A: Foundations and Advances
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A1 Journal article (refereed)
Crystallographic identification of metal-binding sites in Escherichia coli inorganic pyrophosphatase (1996)
Kankare J, Salminen T, Lahti R, Cooperman BS, Baykov AA, Goldman A
Biochemistry
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A1 Journal article (refereed)
Effect of E20D substitution in the active site of Escherichia coli inorganic pyrophosphatase on its quaternary structure and catalytic properties (1996)
Volk SE, Dudarenkov VY, Käpylä J, Kasho VN, Voloshina OA, Salminen T, Goldman A, Lahti R, Baykov AA, Cooperman BS
Biochemistry
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A1 Journal article (refereed)
Structure of Escherichia coli inorganic pyrophosphatase at 2.2 angstrom resolution (1996)
Kankare J, Salminen T, Lahti R, Cooperman BS, Baykov AA, Goldman A
Acta Crystallographica Section D: Biological Crystallography
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A1 Journal article (refereed)
Dissociation of hexameric Escherichia coli inorganic pyrophosphatase into trimers on His-136->Gln or His-140->Gln substitution and its effect on enzyme catalytic properties (1995)
Baykov AA, Dudarenkov VY, Käpylä J, Salminen T, Hyytiä T, Kasho VN, Husgafvel S, Cooperman BS, Goldman A, Lahti R
Journal of Biological Chemistry
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A1 Journal article (refereed)
New crystal forms of Escherichia coli and Saccharomyces cerevisiae soluble inorganic pyrophosphatases. (1995)
P. Heikinheimo, T. Salminen, R. Lahti, B. Cooperman, A. Goldman
Acta Crystallographica Section D: Biological Crystallography
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A1 Journal article (refereed)
Structure and function analysis of Escherichia coli inorganic pyrophosphatase: is a hydroxide ion the key to catalysis? (1995)
Tiina Salminen, Jarmo Käpylä, Pirkko Heikinheimo, Jussi Kankare, Adrian Goldman, Jukka Heinonen, Alexander A. Baykov, Barry S. Cooperman, Reijo Lahti
Biochemistry
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A1 Journal article (refereed)
THE STRUCTURE OF ESCHERICHIA-COLI SOLUBLE INORGANIC PYROPHOSPHATASE AT 2.7-ANGSTROM RESOLUTION (1994)
KANKARE J, NEAL GS, SALMINEN T, GLUMHOFF T, COOPERMAN BS, LAHTI R, GOLDMAN A
Protein Engineering
A1 Journal article (refereed)
Genetic engineering of Escherichia coli inorganic pyrophosphatase. Tyr55 and Tyr141 are important for the structural integrity. (1991)
Lahti R, Salminen T, Latonen S, Heikinheimo P, Pohjanoksa K, Heinonen J.
European Journal of Biochemistry
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Other publications

O2 Other
Receptor-ligand complex models of human alpha(2A)-adrenergic receptor (1998)
Nyranen TH, Hoffran AM, Salminen T, Laaksonen L, Johnson MS, Akademi A
Journal of Molecular Graphics and Modelling

Last updated on 2019-11-05 at 11:29