Peer-reviewed publications

A1 Journal article (refereed)
Analyzing the structural and functional roles of residues from the 'black' and 'gray' clusters of human S100P protein. (2019)
Permyakova ME, Permyakov SE, Kazakov AS, Denesyuk AI, Denessiouk K, Uversky VN, Permyakov EA.
Cell Calcium
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A1 Journal article (refereed)
Distinctive structural motifs co-ordinate the catalytic nucleophile and the residues of the oxyanion hole in the alpha/beta-hydrolase fold enzymes. (2019)
Dimitriou PS, Denesyuk AI, Nakayama T, Johnson MS, Denessiouk K.
Protein Science
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A1 Journal article (refereed)
Experimental Insight into the Structural and Functional Roles of the 'Black' and 'Gray' Clusters in Recoverin, a Calcium Binding Protein with Four EF-Hand Motifs. (2019)
Permyakov SE, Vologzhannikova AS, Nemashkalova EL, Kazakov AS, Denesyuk AI, Denessiouk K, Baksheeva VE, Zamyatnin AA, Zernii EY, Uversky VN, Permyakov EA.
Molecules
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A1 Journal article (refereed)
Monomeric state of S100P protein: Experimental and molecular dynamics study. (2019)
Permyakov SE, Denesyuk AI, Denessiouk KA, Permyakova ME, Kazakov AS, Ismailov RG, Rastrygina VA, Sokolov AS, Permyakov EA.
Cell Calcium
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A1 Journal article (refereed)
Comprehensive analysis of the roles of 'black' and 'gray' clusters in structure and function of rat β-parvalbumin. (2018)
Permyakov SE, Vologzhannikova AA, Khorn PA, Shevelyova MP, Kazakov AS, Emelyanenko VI, Denesyuk AI, Denessiouk K, Uversky VN, Permyakov EA.
Cell Calcium
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A1 Journal article (refereed)
On the relationship between the conserved 'black' and 'gray' structural clusters and intrinsic disorder in parvalbumins. (2018)
Deryusheva EI, Denesyuk AI, Denessiouk K, Uversky VN, Permyakov SE, Permyakov EA.
International Journal of Biological Macromolecules
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A1 Journal article (refereed)
Alpha/beta-hydrolases: A unique structural motif coordinates catalytic acid residue in 40 protein fold families (2017)
Polytimi S. Dimitriou, Alexander Denesyuk, Seiji Takahashi, Satoshi Yamashita, Mark S. Johnson, Toru Nakayama, Konstantin Denessiouk
Proteins
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A1 Journal article (refereed)
Building kit for metal cation binding sites in proteins. (2017)
Denesyuk AI, Permyakov SE, Johnson MS, Permyakov EA, Denessiouk K.
Biochemical and Biophysical Research Communications
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A1 Journal article (refereed)
Interleukin-11 binds specific EF-hand proteins via their conserved structural motifs (2017)
Alexei S. Kazakov, Andrei S. Sokolov, Alisa A. Vologzhannikova, Maria E. Permyakova, Polina A. Khorn, Ramis G. Ismailov, Konstantin A. Denessiouk, Alexander I. Denesyuk, Victoria A. Rastrygina, Viktoriia E. Baksheeva, Evgeni Yu. Zernii, Dmitry V. Zinchenko, Vladimir V. Glazatov, Vladimir N. Uversky, Tajib A. Mirzabekov, Eugene A. Permyakov, Sergei E. Permyakov
Journal of Biomolecular Structure and Dynamics
A1 Journal article (refereed)
Novel calcium recognition constructions in proteins: Calcium blade and EF-hand zone (2017)
Alexander I. Denesyuk, Sergei E. Permyakov, Mark S. Johnson, Eugene A. Permyakov, Konstantin Denessiouk
Biochemical and Biophysical Research Communications
A1 Journal article (refereed)
Interleukin-11 binds specific EF-hand proteins via their conserved structural motifs (2016)
Kazakov AS, Sokolov AS, Vologzhannikova AA, Permyakova ME, Khorn PA, Ismailov RG, Denessiouk KA, Denesyuk AI, Rastrygina VA, Baksheeva VE, Zernii EY, Zinchenko DV, Glazatov VV, Uversky VN, Mirzabekov TA, Permyakov EA, Permyakov SE
Journal of Biomolecular Structure and Dynamics
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A1 Journal article (refereed)
Extremophilic 50S Ribosomal RNA-Binding Protein L35Ae as a Basis for Engineering of an Alternative Protein Scaffold (2015)
Lomonosova AV, Ovchinnikova EV, Kazakov AS, Denesyuk AI, Sofin AD, Mikhailov RV, Ulitin AB, Mirzabekov TA, Permyakov EA, Permyakov SE
PLoS ONE
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A1 Journal article (refereed)
Citrullination of collagen II affects integrin-mediated cell adhesion in a receptor-specific manner (2014)
Sipilä K, Haag S, Denessiouk K, Käpylä J, Peters EC, Denesyuk A, Hansen U, Konttinen Y, Johnson MS, Holmdahl R, Heino J
FASEB Journal
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A1 Journal article (refereed)
Early Chordate Origin of the Vertebrate Integrin aI Domains (2014)
Chouhan BC, Käpylä J, Denessiouk K, Denesyuk A, Heino J, Johnson MS
PLoS ONE
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A1 Journal article (refereed)
Two Structural Motifs within Canonical EF-Hand Calcium- Binding Domains Identify Five Different Classes of Calcium Buffers and Sensors (2014)
Konstantin Denessiouk, Sergei Permyakov, Alexander Denesyuk, Eugene Permyakov, Mark S. Johnson
PLoS ONE
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Last updated on 2018-19-09 at 19:51

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